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Marker Symbol

Browsing Data by Chromosome: '9'

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4930461G14Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930461G14Rik was found for the following reasons:
chromosome - 9
ikmc_project_id - IST12478H9

Gene Details

Marker Name(s): RIKEN cDNA 4930461G14 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr9:58455173-58469623(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922129 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 74879 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells no data available

4930500F10Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930500F10Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930500F10 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:106247959-106248906
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922262 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 75012 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells no data available

Other Mutants/Resources no data available

4930502A04Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930502A04Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930502A04 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:68470902-68520200(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922201 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 74951 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

Other Mutants/Resources no data available

4930506F14Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930506F14Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930506F14 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:107872460-107873238
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922352 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells no data available

Other Mutants/Resources

International Mouse Strain Resource (IMSR): 1 strain/ES cell line
view original data
Data provided by Mouse Genome Informatics (MGI)

4930509E16Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930509E16Rik was found for the following reasons:
chromosome - 9
ikmc_project_id - IST12425B9

Gene Details

Marker Name(s): RIKEN cDNA 4930509E16 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr9:72518250-72531858(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922365 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 75115 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells no data available

Other Mutants/Resources

International Mouse Strain Resource (IMSR): 3 strains/ES cell lines
Other mutations in MGI: 4 mutants
view original data
Data provided by Mouse Genome Informatics (MGI)

4930510E17Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930510E17Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930510E17 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr9:53264621-53280985(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921945 Ensembl Gene ID: ENSMUSG00000032048 Vega Gene ID:
Entrez Gene ID: 74695 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 80222) 		order order view details

Links

ES Cell Clones

Cassette Type 5 Knockout-First Alleles 6 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0613_3_A03 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA pass LOXP pass LACZ pass
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_A04 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_B01 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen pass 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_B04 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_D01 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen pass 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0613_3_B02 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_B03 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_D02 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_D04 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_F01 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_3_G02 HTGRS6006_B_E03 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
82557 HTGRS6006_B_E03 PCS6006_B_E03 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view
82557 HTGRS6006_B_E03 PCS6006_B_E03 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view
Vectors ES Cells
KOMP-Regeneron
 Design Not Possible Projects: VG16194
view original data
Data provided by The International Knockout Mouse Consortium (IKMC)

Other Mutants/Resources

International Mouse Strain Resource (IMSR): 2 strains/ES cell lines
Targeted mutations in MGI: 2 mutants
Other mutations in MGI: 1 mutant
view original data
Data provided by Mouse Genome Informatics (MGI)

4930517N10Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930517N10Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930517N10 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:106503224-106544674
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922299 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 75049 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

Other Mutants/Resources no data available

4930519F24Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930519F24Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930519F24 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr9:100022300-100034670(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922047 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 108970 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells no data available

Other Mutants/Resources

International Mouse Strain Resource (IMSR): 1 strain/ES cell line
view original data
Data provided by Mouse Genome Informatics (MGI)

4930520O04Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930520O04Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930520O04 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms:
Location: Chr9:114368303-114377229(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922366 Ensembl Gene ID: ENSMUSG00000074039 Vega Gene ID: OTTMUSG00000033585
Entrez Gene ID: 75116 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

Other Mutants/Resources no data available

4930524O07Rik

Datasets: Gene Details Europhenome Mice IKMC Vectors and ES Cells Other Mutants/Resources
4930524O07Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4930524O07 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms: 1700037B06Rik
Location: Chr9:106892171-106895182(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1915514 Ensembl Gene ID: ENSMUSG00000090207 Vega Gene ID: OTTMUSG00000032602
Entrez Gene ID: 406209 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

Europhenome no data available

Mice no data available

IKMC Vectors and ES Cells no data available