IKMC Project Report - KOMP-CSD (ID: 115799)

Cep44 MGI:3525111 ENSMUSG00000038215 OTTMUSG00000032837
Pre-pipeline Designs Vectors ES Cells Mice
Vector Construction in Progress

Mice no data available

Mutagenesis Predictions

This gene has 8 wild type transcripts, of which 6 are protein-coding. Following removal of the floxed region, 6 transcripts are predicted to produce a truncated protein product of which 1 may be subject to non-sense mediated decay (NMD). The original allele for this mutation is of type ''. The table below shows the predicted structure of the gene transcripts after application of Flp and Cre (forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found here). Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000040330 protein_coding No protein product (NMD) view

Predicted translation:

MATGDLKRSLRKLEQVLRSLNYPNEVDYVGFFVINLIINQF*

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000582239 UTR UTR
ENSMUSE00000267999 UTR + start codon + CDS UTR + start codon + CDS
ENSMUSE00000267990 CDS Deleted
ENSMUSE00000267983 CDS CDS + stop codon + UTR
ENSMUSE00000990853 CDS
ENSMUSE00000267965 CDS
ENSMUSE00000267957 CDS
ENSMUSE00000267948 CDS
ENSMUSE00000267942 CDS
ENSMUSE00000267937 CDS
ENSMUSE00000267931 CDS + stop codon + UTR
Legend: in frame deleted frameshifted
ENSMUST00000140107 protein_coding No analysis available: incomplete transcript
ENSMUST00000134162 protein_coding No analysis available: incomplete transcript
ENSMUST00000135337 protein_coding No analysis available: incomplete transcript
ENSMUST00000130930 protein_coding No analysis available: incomplete transcript
ENSMUST00000123493 protein_coding No analysis available: incomplete transcript
ENSMUST00000126830 processed_transcript Target region does not overlap transcript
ENSMUST00000127877 processed_transcript Target region does not overlap transcript
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ES Cell Clones no data available

Targeting Vectors no data available

Intermediate Vectors no data available