IKMC Project Report - EUCOMM (ID: 120360)

Madcam1 MGI:103579 ENSMUSG00000020310
Pre-pipeline Designs Vectors ES Cells Mice
ES Cells - No QC Positives

Mice no data available

Mutagenesis Predictions

This gene has 1 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). The original allele for this mutation is of type ''. The table below shows the predicted structure of the gene transcripts after application of Flp and Cre (forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found here). Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000020554 protein_coding Residual N-terminal, residual C-terminal product view

Predicted translation:

MESILALLLALALVPYQLSRASTVVLWIGSLVLGLLALVFLAYRLWKCYRPGPRPDTSSCTHL*

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000463201 ICAM_N (15/109 aa) UTR + start codon + CDS UTR + start codon + CDS
ENSMUSE00000103240 ICAM_N (90/109 aa) CDS Deleted
ENSMUSE00000103242 Adhes-Ig-like (109/111 aa) | ICAM_N (6/109 aa) CDS Deleted
ENSMUSE00000103247 Adhes-Ig-like (3/111 aa) CDS Deleted
ENSMUSE00000476992 CDS + stop codon + UTR CDS + stop codon + UTR
Legend: in frame deleted frameshifted

ES Cell Clones no data available

Targeting Vectors no data available

Intermediate Vectors no data available