IKMC Project Report - KOMP-CSD (ID: 27958)

I830012O16Rik MGI:3698419 ENSMUSG00000062488 OTTMUSG00000016648
Pre-pipeline Designs Vectors ES Cells Mice
Vector Complete

Mice no data available

Mutagenesis Predictions

This gene has 1 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). This mutation is of type 'Deletion' (more information on IKMC alleles can be found here). The table below shows the predicted structure of the gene transcripts. Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000076249 protein_coding Residual N-terminal, unknown C-terminal view

Predicted translation: 

M

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000691772 UTR + start codon + CDS
ENSMUSE00000501253 CDS + stop codon + UTR Deleted
Legend: in frame deleted frameshifted

ES Cell Clones no data available

Targeting Vectors

Genome Browsers: Ensembl (mouse) - UCSC (mouse)
Tools: LRPCR Genotyping Primers
Design ID Vector Type Targeting Vector Cassette Backbone Genbank File
order 212391 Deletion (Promotor Driven Cassette) DPGS00151_A_A03 L1L2_Bact_P L3L4_pZero_DTA_kan view
order 212391 Deletion (Promotor Driven Cassette) PG00151_Y_3_A04 L1L2_Bact_P L3L4_pZero_DTA_kan view
order 212391 Deletion (Promotor Driven Cassette) PG00151_Y_3_A03 L1L2_Bact_P L3L4_pZero_DTA_kan view
show/hide more targeting vectors

Intermediate Vectors

Design ID Vector Type Intermediate Vector
212391 Deletion PCS00151_A_A03