IKMC Project Report - EUCOMM (ID: 29073)

0610009O20Rik MGI:1914089 ENSMUSG00000024442
Pre-pipeline Designs Vectors ES Cells Mice
Vector Construction in Progress

Mice no data available

Mutagenesis Predictions

This gene has 1 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 1 may be subject to non-sense mediated decay (NMD). The original allele for this mutation is of type ''. The table below shows the predicted structure of the gene transcripts after application of Flp and Cre (forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found here). Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000025314 protein_coding No protein product (NMD) view

Predicted translation:

MWRLTGILGRALPRLLGPGFRGITPKPTSSDGSQTTSPTLPLTRLSFDRSGSHGSKRSRDPKCCGWKDAFHWMSAHVSPN
TLRDAISWGQRT*

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000269236 UTR + start codon + CDS UTR + start codon + CDS
ENSMUSE00000142363 CDS CDS
ENSMUSE00000269189 CDS CDS
ENSMUSE00000269162 CDS Deleted
ENSMUSE00000142370 CDS Deleted
ENSMUSE00000142358 CDS Deleted
ENSMUSE00000142371 CDS Deleted
ENSMUSE00000269079 Sel1-like (20/20 aa) | Sel1-like (22/36 aa) CDS CDS + stop codon + UTR
ENSMUSE00000269060 Sel1-like (14/36 aa) | Sel1-like (36/36 aa) CDS
ENSMUSE00000269037 Sel1-like (31/33 aa) CDS
ENSMUSE00000269021 Sel1-like (2/33 aa) | Sel1-like (34/34 aa) CDS
ENSMUSE00000268992 CDS + stop codon + UTR
ENSMUSE00000478814 UTR UTR
Legend: in frame deleted frameshifted

ES Cell Clones no data available

Targeting Vectors no data available

Intermediate Vectors no data available