IKMC Project Report - KOMP-CSD (ID: 30210)

1810030O07Rik MGI:1916405 ENSMUSG00000044148 OTTMUSG00000016970
Pre-pipeline Designs Vectors ES Cells Mice
Vector - Initial Attempt Unsuccessful

Mice no data available

Mutagenesis Predictions

This gene has 1 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). The original allele for this mutation is of type ''. The table below shows the predicted structure of the gene transcripts after application of Flp and Cre (forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found here). Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000060108 protein_coding Residual N-terminal, residual C-terminal product view

Predicted translation:

MVVSELAARLNCAEYKNWVKAGHCLLLLRSCLQGFIDREVLSFHRGLLAAVPGLGPHATCRGGSRCSPRARQFQPQCQVC
AEWKHEILRHHINRNGDVHWGNCKPGLWPKDPWEVAKISNQLDVVKGFLGSNTDLRNGLTEDLQKLESLHLQHQKQTSKD
AGRQTPERKA*

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000363781 UTR + start codon + CDS UTR + start codon + CDS
ENSMUSE00000392409 CDS CDS
ENSMUSE00000351651 CDS Deleted
ENSMUSE00000400322 CDS Deleted
ENSMUSE00000359416 CDS Deleted
ENSMUSE00000401328 CDS + stop codon + UTR CDS + stop codon + UTR
ENSMUSE00000379683 UTR UTR
Legend: in frame deleted frameshifted

ES Cell Clones no data available

Targeting Vectors no data available

Intermediate Vectors no data available