This gene has 10 wild type transcripts,
of which 1 are protein-coding.
Following removal of the floxed region, 1
transcript is
predicted to produce a truncated protein product of which
1 may be subject to non-sense mediated decay (NMD).
The original allele for this mutation is of type ''. The table below
shows the predicted structure of the gene transcripts after application of Flp and Cre
(forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found
here).
Click the 'view' button for each transcript to see the full prediction for that transcript.
| Ensembl transcript id |
Ensembl Biotype |
Floxed transcript description |
Details |
|
ENSMUST00000004985
|
protein_coding |
No protein product (NMD) |
view
|
|
Predicted translation:
MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKEN
SEQPQFPAKSKKPSSKGKRKESCSKHASGTSFHLPQPSFRVVDTGSQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEED
IAWLDMVNEKRRADGHSSVSADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDECHNSNVILFCDICNLAVH
QECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPAR
WKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTTFTVRKTAYCEAHSPSVAVARRKGDSP
RSLSEVGDEDGPKEGGGEEEQEEAEEEGQEGQGGVGSPLKGVSKKGKMSLKQKIKKEPEEAGREAPSITLPMVTVPQIPS
YRLNKICSGLSFQRKTQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLER
ARLLIELIRKREKLKREQVKVQQAAMELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRR
KLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERGTHLPESPRLEDFYR
FSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRRVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGE
LPAGSRGDTAVLEQAQQEEPEEEGDRDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEE
LLEKSALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGTLENGEDHGPEDDPA
SPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETVA*
| Legend: |
|
in frame |
|
deleted |
|
frameshifted |
|
|
ENSMUST00000156029
|
retained_intron |
No analysis available: incomplete transcript |
|
|
ENSMUST00000140973
|
processed_transcript |
No analysis available: incomplete transcript |
|
|
ENSMUST00000127007
|
processed_transcript |
Target region does not overlap transcript |
|
|
ENSMUST00000140587
|
processed_transcript |
No analysis available: incomplete transcript |
|
|
ENSMUST00000144022
|
processed_transcript |
No analysis available: incomplete transcript |
|
|
ENSMUST00000126868
|
processed_transcript |
Target region does not overlap transcript |
|
|
ENSMUST00000148149
|
retained_intron |
Target region does not overlap transcript |
|
|
ENSMUST00000136233
|
processed_transcript |
Target region does not overlap transcript |
|
|
ENSMUST00000123942
|
processed_transcript |
Target region does not overlap transcript |
|
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