IKMC Project Report - KOMP-CSD (ID: 49446)

Kcnk3 MGI:1100509 ENSMUSG00000049265
Pre-pipeline Designs Vectors ES Cells Mice
Vector - Initial Attempt Unsuccessful

Mice no data available

Mutagenesis Predictions

This gene has 1 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). The original allele for this mutation is of type ''. The table below shows the predicted structure of the gene transcripts after application of Flp and Cre (forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found here). Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000066295 protein_coding Residual N-terminal, unknown C-terminal view

Predicted translation:

MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPEMIERQRLELRQLELRARYNLSEGGYEELERVVLRLKPHKAGVQWRF
AGSFYFAITVITTI

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000601675 Ion_trans_2 (18/56 aa) UTR + start codon + CDS
ENSMUSE00000655056 Ion_trans_2 (39/56 aa) | Ion_trans_2 (82/82 aa) CDS + stop codon + UTR Deleted
Legend: in frame deleted frameshifted

ES Cell Clones no data available

Targeting Vectors no data available

Intermediate Vectors no data available