IKMC Project Report - NorCOMM (ID: 66087)

U90926 MGI:1930915 ENSMUSG00000029409
Pre-pipeline Designs Vectors ES Cells Mice
ES Cells - Targeting Confirmed

Mice no data available

Mutagenesis Predictions

This gene has 1 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). This mutation is of type 'Deletion' (more information on IKMC alleles can be found here). The table below shows the predicted structure of the gene transcripts. Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000031356 protein_coding No protein product

ES Cell Clones (Conditional Ready)

Note: These mutations can be made conditional by a "docking" procedure which uses the attP/puro docking site in the cassette.

Genome Browsers: Ensembl (mouse) - UCSC (mouse)
Tools: Southern Blot Tool
ES Cell Clone Targeting Vector Allele Allele Type Parental ES Cell Line Genbank File Mouse QC Data
order N01860P1_C_159W_A4 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01860P1_C_159W_C3 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01860P1_C_159W_C4 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01860P1_C_159W_D3 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01860P1_C_159W_D4 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01860P1_C_159W_E3 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01860P1_C_159W_G3 N01860P1_T_185.5_A07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
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Targeting Vectors

Genome Browsers: Ensembl (mouse) - UCSC (mouse)
Design ID Vector Type Targeting Vector Cassette Backbone Genbank File
order 237369 Deletion (Promotor Driven Cassette) N01860P1_T_185.5_A07 L1L2_GOHANU L3L4_pZero_DTA_kan view

Intermediate Vectors

Design ID Vector Type Intermediate Vector
237369 Deletion N01860P1_I_185.5_A07