IKMC Project Report - EUCOMM (ID: 82254)

Selm MGI:2149786 ENSMUSG00000075702 OTTMUSG00000005021
Pre-pipeline Designs Vectors ES Cells Mice
Vector Unsuccessful - Project Terminated

Mice no data available

Mutagenesis Predictions

This gene has 3 wild type transcripts, of which 1 are protein-coding. Following removal of the floxed region, 1 transcript is predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). The original allele for this mutation is of type ''. The table below shows the predicted structure of the gene transcripts after application of Flp and Cre (forming a 'Knockout-First, Post-Flp and Cre - Deletion, No Reporter' allele - more information on IKMC alleles can be found here). Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000094469 protein_coding Residual N-terminal, unknown C-terminal view

Predicted translation:

MSILLSPPSLLLLLAALVAPATSTTNYRPDWNRLRGLARGRVE

Ensembl Exon ID Pfam Domains WildType Floxed
ENSMUSE00000723062 Sep15_SelM (4/77 aa) UTR + start codon + CDS UTR + start codon + CDS
ENSMUSE00001060773 Sep15_SelM (12/77 aa) CDS Deleted
ENSMUSE00000660063 Sep15_SelM (12/77 aa) CDS Deleted
ENSMUSE00000660062 Sep15_SelM (27/77 aa) CDS Deleted
ENSMUSE00000660049 Sep15_SelM (23/77 aa) CDS + stop codon + UTR Deleted
Legend: in frame deleted frameshifted
ENSMUST00000123677 processed_transcript No analysis available: incomplete transcript
ENSMUST00000131865 processed_transcript No analysis available: incomplete transcript
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ES Cell Clones no data available

Targeting Vectors no data available

Intermediate Vectors no data available