IKMC Project Report - NorCOMM (ID: 67734)

1700019D03Rik MGI:1914330 ENSMUSG00000043629 OTTMUSG00000021472
Pre-pipeline Designs Vectors ES Cells Mice
ES Cells - Targeting Confirmed

Mice no data available

Mutagenesis Predictions

This gene has 3 wild type transcripts, of which 3 are protein-coding. Following removal of the floxed region, 3 transcripts are predicted to produce a truncated protein product of which 0 may be subject to non-sense mediated decay (NMD). This mutation is of type 'Deletion' (more information on IKMC alleles can be found here). The table below shows the predicted structure of the gene transcripts. Click the 'view' button for each transcript to see the full prediction for that transcript.

Ensembl transcript id Ensembl Biotype Floxed transcript description Details
ENSMUST00000050567 protein_coding No protein product
ENSMUST00000114493 protein_coding No protein product
ENSMUST00000114492 protein_coding No protein product
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ES Cell Clones (Conditional Ready)

Note: These mutations can be made conditional by a "docking" procedure which uses the attP/puro docking site in the cassette.

Genome Browsers: Ensembl (mouse) - UCSC (mouse)
Tools: Southern Blot Tool
ES Cell Clone Targeting Vector Allele Allele Type Parental ES Cell Line Genbank File Mouse QC Data
order N01993P1_C_199W_A1 N01993P1_T_186.5_G07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
order N01993P1_C_199W_B3 N01993P1_T_186.5_G07 Deletion (Promotor Driven Cassette) C2 view no no data reported    ( about )
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Targeting Vectors

Genome Browsers: Ensembl (mouse) - UCSC (mouse)
Design ID Vector Type Targeting Vector Cassette Backbone Genbank File
order 239053 Deletion (Promotor Driven Cassette) N01993P1_T_186.5_G07 L1L2_GOHANU L3L4_pZero_DTA_kan view

Intermediate Vectors

Design ID Vector Type Intermediate Vector
239053 Deletion N01993P1_I_186.5_G07